Updated: April 2022

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34. Watson, K. B., Lehnert, S.J., Bentzen, P., Kess, T., Einfeldt, A., Duffy, S., Perriman, B., Lien, S., Kent, M., Bradbury, I.R. 2022. Environmentally associated chromosomal structural variation influences fine-scale population structure of Atlantic salmon (Salmo salar). Molecular Ecology 31, 1057-1075.

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33. Kess, T., Einfeldt, A.L., Wringe, B., Lehnert, S.J., Layton, K.K.S., McBride, M.C., Robert, D., Fisher, J., Le Bris, A., den Heyer, C., Shackell, N., Ruzzante, D.E., Bentzen, P., Bradbury, I.R. 2021. A putative structural variant and environmental variation associated with genomic divergence across the Northwest Atlantic in Atlantic Halibut. ICES Journal of Marine Science 78, 2371-2384.

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32. Bradbury, I.R., Lehnert, S.J., Messmer, A., Duffy, S.J., Verspoor, E., Kess, T., Gilbey, J., Wennevik, V., Robertson, M., Chaput, G., Sheehan, T., Bentzen, P., Dempson, J.B., Reddin, D. 2021. Over half a century of range-wide genetic assignment reveals long-distance oceanic migration in Atlantic salmon. ICES Journal of Marine Science 78, 1434-1443.

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​31. Kess, T., Dempson, J.B., Lehnert, S.J., Layton, K.K.S., Einfeldt, A., Bentzen, P., Salisbury, S.J., Messmer, A., Duffy, S.J., Ruzzante, D.E., Nugent, C.M., Ferguson, M.M., Leong, J.S., Koop, B.F., O'Connell, M., Bradbury, I.R. 2021. Genomic basis of extreme deep-water adaptation in sympatric Arctic Charr (Salvelinus alpinus) morphs. Molecular Ecology 30, 4415-4432.

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30. Hall, J.R., Lehnert, S.J., Gonzalez, E., Kumar, S., Hanlon, J.M., Morris, C.J., Rise, M. L. 2021. Snow crab (Chionoecetes opilio) hepatopancreas transcriptome: identification and testing of candidate molecular biomarkers of seismic survey impact. Fisheries Research 234, 105794.

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29. Layton, K.K.S., Senlgrove, P.V.R., Dempson, J.B., Kess, T., Lehnert, S.J., Bentzen, P., Duffy, S.J., Messmer, A.M., Stanley, R.R.E., DiBacco, C., Salisbury, S.J., Ruzzante, D.E., Nugent, C.M., Ferguson, M.M., Leong, J.S., Koop, B.F., Bradbury, I.R. 2021. Genomic evidence of past and future climate-linked loss in a migratory Arctic fish. Nature Climate Change 11, 551.

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28. Roy, D., Lehnert, S.J., Venney, C.J., Walter, R., Heath, D.D. 2020. NGS-usat: Bioinformatics framework supporting high throughput microsatellite genotyping from next generation sequencing platforms. Conservation Genetic Resources 13, 161-173.

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27. Lehnert, S.J., Kess, T., Bentzen, P., Clément, M., Bradbury, I.R. 2020. Selection and recombination shape patterns of genomic differentiation between European and North American Atlantic salmon (Salmo salar). Molecular Ecology 29, 2160-2175.

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26. Lehnert, S.J., Baillie, S.M., MacMillan, J., Paterson, I.G., Buhariwalla, C.F., Bradbury, I.R., Bentzen, P. 2020. Over half a century of stocking has resulted in limited hatchery introgression in wild brook trout (Salvelinus fontinalis) populations of Nova Scotia. Evolutionary Applications 13,1069–1089

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25. Bradbury, I.R., Duffy, S., Lehnert, S.J., Johannsson, R., Fridriksson, J.H., Castellani, M., Burgetz, I., Sylvester, E.V.A., Messmer, A., Layton, K.K.S., Kelly, N., Dempson, J.B., Fleming, I.A. 2020. Model-based evaluation of the genetic impacts of farm escapes on wild Atlantic salmon. Submitted: Aquaculture Environment Interactions, 12, 45-59

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24. Kess, T., Bentzen, P., Lehnert, S.J., Sylvester, E.V.A., Lien, S., Kent, M.P., Sinclair-Waters, M., Morris, C., Wringe, B., Fairweather, R., Bradbury, I.R. 2020. Modular chromosome rearrangements reveal parallel and nonparallel adaptation in a marine fish. Ecology and Evolution 10, 638-653

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23. Lehnert, S.J., Christensen, K.A., Vandersteen, W.E., Sakhrani, D., Pitcher, T.E., Heath, J.W., Koop, B.F., Heath, D.D., Devlin, R.H. 2019. Carotenoid pigmentation in salmon: variation in expression at BCO2-l locus controls key fitness trait affecting red coloration. Proceedings of Royal Society B 286, 20191588.

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22. Lehnert, S.J., Kess, T., Bentzen, P., Kent, M.P., Lien, S., Gilbey, J., Clement, M., Jeffery, N.W., Waples, R.S., Bradbury, I.R. 2019. Genomic signatures and correlates of widespread population declines in salmon. Nature Communications 10:2996.

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21. Semeniuk, C.A.D., Capelle, P.M., Dender, M.G.E., Devlin, R.H., Dixon, B., Drown, J., Heath, J.W., Hepburn, R., Higgs, D.M., Janisse, K., Lehnert, S.J., Love, O.P., Mayrand, J., Mickle, M., Pitcher, T.E., Neff, B., Semple, S.L., Smith, J.L., Toews, S., Venney, C., Wellband, K, Heath, D.D. 2019. Domestic-wild hybridization to improve aquaculture performance in Chinook salmon. Aquaculture 511:734255.

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20. Lowen, J.B., Hart, D.R., Stanley, R.R.E., Lehnert, S.J., Bradbury, I.R., DiBacco, C. 2019. Assessing effects of genetic, environmental and biotic gradients in Species distribution modelling. ICES Journal of Marine Science fsz049.

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19. Kess, T., Bentzen, P., Lehnert, S.J., Sylvester, E.V.A., Lien, S., Kent, M.P., Sinclair-Waters, M., Morris, C., Regular, P., Fairweather, R., Bradbury I.R. 2019. A migration-associated supergene reveals loss of biocomplexity in Atlantic cod. Science Advances 5:eaav2461.

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18. Lehnert, S.J., Bentzen, P., Kess, T., Lien, S., Horne, J.B., Clément, M., Bradbury, I. R. 2019. Chromosomal polymorphisms track trans-Atlantic divergence and secondary contact in Atlantic salmon. Molecular Ecology 28:2074-2087.

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17. Arnekleiv, J.V., Davidsen, J.G., Sheehan, T.F., Lehnert, S.J., Bradbury, I.R., Ronning, L., Sjursen, A.D., Kjaerstad, G., Lubinski, B.A., Nilssen, K.J. 2019. Demographic and genetic description of Greenland’s only indigenous Atlantic salmon (Salmo salar) population. Journal of Fish Biology 94:154-164.

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16. Lehnert, S.J., DiBacco, C., Van Wyngaarden, M., Jeffery, N.W., Lowen, J.B., Wringe, B.F., Stanley, R.R.E., Hamilton, L.C., Bradbury, I.R. 2019. Fine-scale temperature associated genetic structure between inshore and offshore populations of sea scallop (Placopecten magellanicus). Heredity 122:69-80.

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15. Lehnert, S.J., Garver, K.A., Richard, J., Devlin, R.H., Lajoie, C., Pitcher, T.E., Heath, D.D. 2018. Significant differences in maternal carotenoid provisioning and effects on offspring fitness in Chinook salmon colour morphs. Journal of Evolutionary Biology 31:1876-1893.

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14. Sylvester, E.V.A., Beiko, R., Bentzen, P., Paterson, I.G., Horne, J.B., Watson, B., Lehnert, S.J., Duffy, S., Clément, M., Robertson, M.J., Bradbury, I.R. 2018. Environmental extremes drive population structure at the northern range limit of Atlantic salmon in North America. Molecular Ecology 27:4026-4040.

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13. Lehnert, S.J., DiBacco, C., Jeffery, N.W., Blakeslee, A.M.H., Isaksson, J., Roman, J., Wringe, B.F., Stanley, R.E.E., Matheson, K., McKenzie, C.H., Hamilton, L.C., Bradbury, I.R. 2018. Temporal dynamics of genetic clines of invasive European green crab (Carcinus maenas) in eastern North America. Evolutionary Applications 11:1656-1670.

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12. Bradbury, I.R., Wringe, B.F., Watson, B., Paterson, I.G., Horne, J.B. Beiko, R., Lehnert, S.J., Clément, M., Anderson, E.C, Jeffery, N.W., Duffy, S., Sylvester, E.V.A., Robertson, M.J., Bentzen, P. 2018. Genotyping-by-sequencing of genome-wide microsatellite loci reveals fine-scale harvest composition in a coastal Atlantic salmon fishery. Evolutionary Applications 11:918-930.

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11. Lehnert, S.J., Helou, L., Pitcher, T.E., Heath, J.W., Heath, D.D. 2018. Sperm competition, but not major histocompatibility divergence, drives differential fertilization success between alternative reproductive tactics of Chinook salmon. Journal of Evolutionary Biology 31:88-97.

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10. Domingo, T., Starosta, K., Chester, A., Williams, J., Lehnert, S.J., Gantner, N., Alava, J.J. 2018. Fukushima-derived radioactivity measurements in Pacific salmon and soil samples collected in British Columbia, Canada. Canadian Journal of Chemistry 96:124-131.

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9. Wiper, M., Lehnert, S.J., Heath, D.D., Higgs, D.M. 2017. Neutral genetic variation in adult Chinook salmon (Oncorhynchus tshawytscha) shows effects on a somatic trade-off and morphological laterality. Royal Society Open Science 4:170989.

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8. Lehnert, S.J., Butts, I.A.E., Flannery, E.W., Peters, K.M., Heath, D.D., Pitcher, T.E. 2017. Effects of ovarian fluid and genetic differences on sperm performance and fertilization success of alternative reproductive tactics in Chinook salmon. Journal of Evolutionary Biology 30:1236–1245.

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7. Lehnert, S.J., Devlin, R.H., Pitcher, T.E., Semeniuk, C.A.D., Heath, D.D. 2017. Redder isn’t always better: cost of carotenoids in Chinook salmon eggs. Behavioral Ecology 28: 549-555.

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6. Lehnert, S.J., Heath, D.D., Devlin, R.H., Pitcher, T.E. 2017. Post-spawning sexual selection in red and white Chinook salmon (Oncorhynchus tshawytscha). Behavioral Ecology 28: 1-10.

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5. Falica, B.K., Lehnert, S.J., Pitcher, T.E., Heath, D.D., Higgs, D.M. 2017. Ontogenetic shifts in genetic and maternal effects on length and survival in Chinook salmon (Oncorhynchus tshawytscha). Aquaculture 468:218-225.

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4. Lehnert, S.J., Pitcher, T.E., Devlin, R.H., Heath, D.D. 2016. Red and white Chinook salmon: mate choice and genetic divergence. Molecular Ecology 25:1259-1274.

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3. Lehnert, S.J., Love, O.P., Pitcher, T.E., Higgs, D.M., Heath, D.D. 2014. Multigenerational outbreeding effects in Chinook salmon (Oncorhynchus tshawytscha). Genetica 142:281-293.

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2. Lehnert, S.J., Heath, J.W., Heath, D.D. 2013. Ecological and genetic risks arising from reproductive interactions between wild and farmed Chinook salmon. Canadian Journal of Fisheries and Aquatic Sciences 70:1691-1698.

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1. Lehnert, S.J., Heath, D.D., Pitcher, T.E. 2012. Sperm trait differences between wild and farmed Chinook salmon (Oncorhynchus tshawytscha). Aquaculture 344:242-247.

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